PDBsum entry 3vgo Go to PDB code:  Pore analysis for: 3vgo calculated with MOLE 2.0 PDB id 3vgo Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 pores, coloured by radius 3 pores, coloured by radius 3 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.14 1.94 73.2 -0.33 0.31 12.9 70 3 3 3 5 8 1 0   2 1.21 1.64 90.0 -1.19 -0.38 12.8 74 4 3 4 6 5 2 0   3 1.18 1.18 105.3 -0.11 0.11 11.3 77 5 2 5 8 5 3 1   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.