spacer
spacer

PDBsum entry 3vf9

Go to PDB code: 
protein ligands links
Transferase/transferase inhibitor PDB id
3vf9

 

 

 

 

Loading ...

 
JSmol PyMol  
Contents
Protein chain
265 a.a.
Ligands
477
Waters ×43
PDB id:
3vf9
Name: Transferase/transferase inhibitor
Title: Crystal structure of spleen tyrosine kinase syk catalytic domain with thienopyrazolylindole inhibitor 027
Structure: Tyrosine-protein kinase syk. Chain: a. Fragment: unp residues 343-635. Synonym: spleen tyrosine kinase. Engineered: yes
Source: Homo sapiens. Human. Organism_taxid: 9606. Gene: syk. Expressed in: spodoptera frugiperda. Expression_system_taxid: 7108. Expression_system_cell_line: sf9.
Resolution:
2.30Å     R-factor:   0.255     R-free:   0.267
Authors: L.R.Mclean,Y.Zhang
Key ref: L.R.McLean et al. (2012). X-ray crystallographic structure-based design of selective thienopyrazole inhibitors for interleukin-2-inducible tyrosine kinase. Bioorg Med Chem Lett, 22, 3296-3300. PubMed id: 22464456
Date:
09-Jan-12     Release date:   02-May-12    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chain
Pfam   ArchSchema ?
P43405  (KSYK_HUMAN) -  Tyrosine-protein kinase SYK from Homo sapiens
Seq:
Struc:
 
Seq:
Struc:
635 a.a.
265 a.a.
Key:    PfamA domain  Secondary structure  CATH domain

 Enzyme reactions 
   Enzyme class: E.C.2.7.10.2  - non-specific protein-tyrosine kinase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: L-tyrosyl-[protein] + ATP = O-phospho-L-tyrosyl-[protein] + ADP + H+
L-tyrosyl-[protein]
+ ATP
= O-phospho-L-tyrosyl-[protein]
+ ADP
+ H(+)
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

 
    Added reference    
 
 
Bioorg Med Chem Lett 22:3296-3300 (2012)
PubMed id: 22464456  
 
 
X-ray crystallographic structure-based design of selective thienopyrazole inhibitors for interleukin-2-inducible tyrosine kinase.
L.R.McLean, Y.Zhang, N.Zaidi, X.Bi, R.Wang, R.Dharanipragada, J.G.Jurcak, T.A.Gillespy, Z.Zhao, K.Y.Musick, Y.M.Choi, M.Barrague, J.Peppard, M.Smicker, M.Duguid, A.Parkar, J.Fordham, D.Kominos.
 
  ABSTRACT  
 
No abstract given.

 

 

spacer

spacer