PDBsum entry 3vf0 Go to PDB code:  Tunnel analysis for: 3vf0 calculated with MOLE 2.0 PDB id 3vf0 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   1 tunnel, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.96 1.96 16.3 0.51 0.13 1.8 71 0 0 2 4 2 0 2  GOL 3009 B 2 1.22 1.22 19.4 -0.57 -0.39 4.6 74 1 1 3 3 2 1 2  GOL 3001 B GOL 3009 B 3 1.75 1.85 24.7 0.45 -0.06 2.2 84 1 0 3 6 1 0 1  GOL 3009 B 4 1.25 1.40 19.4 -1.56 -0.71 21.5 79 2 3 0 3 0 0 0   5 1.17 1.33 18.0 -0.71 -0.29 17.8 89 3 0 1 4 0 0 0  GOL 3006 B 6 1.17 1.33 21.2 -0.64 -0.09 18.7 76 5 0 0 3 1 0 0  GOL 2002 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.