PDBsum entry 3v7a Go to PDB code:  Tunnel analysis for: 3v7a calculated with MOLE 2.0 PDB id 3v7a Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   9 tunnels, coloured by tunnel radius 9 tunnels, coloured by tunnel radius 9 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.02 2.08 18.4 -1.79 -0.30 18.4 80 3 0 2 1 2 0 0   2 2.03 2.28 21.6 -1.92 -0.53 18.8 91 3 1 3 1 1 0 0   3 1.28 1.51 19.0 -0.14 -0.33 4.5 87 1 0 3 3 1 1 0   4 1.27 1.51 19.1 -0.25 -0.32 6.2 87 1 0 2 4 1 1 0   5 1.27 1.50 22.4 -0.13 -0.21 8.0 87 1 0 2 3 1 2 0   6 1.28 1.51 24.6 0.16 -0.09 5.3 78 1 0 1 4 2 2 0   7 1.34 1.50 17.6 0.09 -0.20 6.1 81 1 0 1 3 1 1 0   8 1.47 1.52 21.7 -0.24 -0.26 8.4 86 1 0 2 4 1 2 0   9 1.40 1.48 25.1 0.32 -0.10 5.1 83 1 0 2 4 2 2 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.