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PDBsum entry 3v6z

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protein Protein-protein interface(s) links
Immune system PDB id
3v6z

 

 

 

 

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Contents
Protein chains
221 a.a.
219 a.a.
148 a.a.
PDB id:
3v6z
Name: Immune system
Title: Crystal structure of hepatitis b virus e-antigen
Structure: Fab e6 heavy chain. Chain: a, c. Fragment: fab e6 heavy chain. Fab e6 light chain. Chain: b, d. Fragment: fab e6 light chain. E-antigen. Chain: e, f. Fragment: hbv e-antigen (cp(-10)149).
Source: Mus musculus. Organism_taxid: 10090. Hepatitis b virus. Hbv. Organism_taxid: 10407. Gene: prec/c
Resolution:
3.34Å     R-factor:   0.234     R-free:   0.233
Authors: M.A.Dimattia,N.R.Watts,S.J.Stahl,J.M.Grimes,A.C.Steven,D.I.Stuart, P.T.Wingfield
Key ref: M.A.DiMattia et al. (2013). Antigenic switching of hepatitis B virus by alternative dimerization of the capsid protein. Structure, 21, 133-142. PubMed id: 23219881
Date:
20-Dec-11     Release date:   06-Feb-13    
PROCHECK
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 Headers
 References

Protein chains
No UniProt id for this chain
Struc: 221 a.a.
Protein chains
No UniProt id for this chain
Struc: 219 a.a.
Protein chains
Pfam   ArchSchema ?
Q9QMH8  (Q9QMH8_HBV) -  Capsid protein from Hepatitis B virus
Seq:
Struc:
212 a.a.
148 a.a.*
Key:    PfamA domain  Secondary structure  CATH domain
* PDB and UniProt seqs differ at 5 residue positions (black crosses)

 

 
Structure 21:133-142 (2013)
PubMed id: 23219881  
 
 
Antigenic switching of hepatitis B virus by alternative dimerization of the capsid protein.
M.A.DiMattia, N.R.Watts, S.J.Stahl, J.M.Grimes, A.C.Steven, D.I.Stuart, P.T.Wingfield.
 
  ABSTRACT  
 
Chronic hepatitis B virus (HBV) infection afflicts millions worldwide with cirrhosis and liver cancer. HBV e-antigen (HBeAg), a clinical marker for disease severity, is a nonparticulate variant of the protein (core antigen, HBcAg) that forms the building-blocks of capsids. HBeAg is not required for virion production, but is implicated in establishing immune tolerance and chronic infection. Here, we report the crystal structure of HBeAg, which clarifies how the short N-terminal propeptide of HBeAg induces a radically altered mode of dimerization relative to HBcAg (∼140° rotation), locked into place through formation of intramolecular disulfide bridges. This structural switch precludes capsid assembly and engenders a distinct antigenic repertoire, explaining why the two antigens are cross-reactive at the T cell level (through sequence identity) but not at the B cell level (through conformation). The structure offers insight into how HBeAg may establish immune tolerance for HBcAg while evading its robust immunogenicity.
 

 

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