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PDBsum entry 3v4v

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protein ligands metals Protein-protein interface(s) links
Cell adhesion PDB id
3v4v

 

 

 

 

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Contents
Protein chains
582 a.a.
375 a.a.
211 a.a.
217 a.a.
Ligands
NAG-NAG-BMA-MAN ×2
NAG ×11
TRS
0DU ×2
Metals
_CA ×10
_MG ×2
Waters ×31
PDB id:
3v4v
Name: Cell adhesion
Title: Crystal structure of a4b7 headpiece complexed with fab act-1 and ro0505376
Structure: Integrin alpha-4. Chain: a, c. Fragment: unp residues 34-620. Synonym: cd49 antigen-like family member d, integrin alpha-iv, vla-4 subunit alpha. Engineered: yes. Mutation: yes. Integrin beta-7. Chain: b, d.
Source: Homo sapiens. Human. Organism_taxid: 9606. Gene: itga4, cd49d. Expressed in: cricetulus griseus. Expression_system_taxid: 10029. Expression_system_cell_line: cho. Gene: itgb7. Mus musculus.
Resolution:
3.10Å     R-factor:   0.198     R-free:   0.231
Authors: Y.Yu,J.Zhu,T.A.Springer
Key ref: Y.Yu et al. (2012). Structural specializations of α(4)β(7), an integrin that mediates rolling adhesion. J Cell Biol, 196, 131-146. PubMed id: 22232704
Date:
15-Dec-11     Release date:   11-Jan-12    
PROCHECK
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 Headers
 References

Protein chains
Pfam   ArchSchema ?
P13612  (ITA4_HUMAN) -  Integrin alpha-4 from Homo sapiens
Seq:
Struc:
 
Seq:
Struc:
 
Seq:
Struc:
1032 a.a.
582 a.a.
Protein chains
Pfam   ArchSchema ?
P26010  (ITB7_HUMAN) -  Integrin beta-7 from Homo sapiens
Seq:
Struc:
 
Seq:
Struc:
798 a.a.
375 a.a.
Protein chains
No UniProt id for this chain
Struc: 211 a.a.
Protein chains
No UniProt id for this chain
Struc: 217 a.a.
Key:    PfamA domain  Secondary structure  CATH domain

 

 
J Cell Biol 196:131-146 (2012)
PubMed id: 22232704  
 
 
Structural specializations of α(4)β(7), an integrin that mediates rolling adhesion.
Y.Yu, J.Zhu, L.Z.Mi, T.Walz, H.Sun, J.Chen, T.A.Springer.
 
  ABSTRACT  
 
No abstract given.

 

 

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