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PDBsum entry 3v47
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Pore analysis for: 3v47 calculated with  MOLE 2.0
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PDB id
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3v47
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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12 pores,
coloured by radius |
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10 pores,
coloured by radius
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10 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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3.36 |
4.96 |
28.9 |
-1.05 |
-0.62 |
13.3 |
91 |
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5 |
2 |
4 |
3 |
0 |
0 |
0 |
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2 |
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2.75 |
2.91 |
37.8 |
-1.16 |
-0.82 |
12.3 |
94 |
3 |
3 |
5 |
1 |
0 |
0 |
0 |
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3 |
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3.21 |
4.10 |
42.8 |
-2.42 |
-0.60 |
25.8 |
81 |
7 |
5 |
5 |
3 |
1 |
0 |
0 |
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4 |
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1.29 |
1.29 |
51.4 |
-2.11 |
-0.69 |
20.2 |
87 |
3 |
6 |
5 |
1 |
1 |
0 |
0 |
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5 |
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3.06 |
4.08 |
55.5 |
-1.27 |
-0.56 |
19.6 |
86 |
6 |
2 |
2 |
4 |
0 |
0 |
0 |
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6 |
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3.31 |
4.11 |
62.9 |
-1.79 |
-0.58 |
20.2 |
87 |
8 |
6 |
9 |
4 |
2 |
0 |
0 |
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7 |
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1.28 |
1.30 |
63.5 |
-2.10 |
-0.67 |
20.3 |
88 |
5 |
6 |
9 |
1 |
1 |
0 |
0 |
NAG 2 H
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8 |
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1.39 |
1.38 |
69.2 |
-1.46 |
-0.33 |
17.2 |
84 |
6 |
5 |
10 |
1 |
4 |
0 |
0 |
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9 |
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3.33 |
4.99 |
89.8 |
-1.24 |
-0.70 |
15.0 |
94 |
5 |
4 |
8 |
4 |
0 |
1 |
0 |
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10 |
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1.98 |
3.58 |
93.1 |
-2.40 |
-0.64 |
23.0 |
86 |
10 |
9 |
17 |
2 |
2 |
0 |
0 |
NAG 2 H
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program