PDBsum entry 3v0a Go to PDB code:  Pore analysis for: 3v0a calculated with MOLE 2.0 PDB id 3v0a Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   24 pores, coloured by radius 26 pores, coloured by radius 26 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.36 1.50 33.1 -1.56 -0.28 13.7 88 2 3 8 4 3 0 0  SO4 1304 A 2 1.57 1.80 42.2 -1.57 -0.07 14.5 84 4 3 7 4 2 0 0   3 1.74 1.93 47.3 -2.32 -0.56 23.3 84 6 3 6 4 1 0 0  SO4 1196 B 4 1.22 2.92 48.5 -1.02 -0.29 18.4 90 3 5 5 7 1 0 0  MES 1204 B 5 2.74 2.90 76.2 -1.64 -0.23 28.1 83 10 10 6 9 3 0 0  MES 1204 B 6 1.98 2.63 80.0 -2.25 -0.46 22.8 85 10 7 15 5 2 2 0  SO4 1301 A SO4 1197 B 7 1.45 2.98 80.3 -1.84 -0.60 25.3 88 7 8 5 5 1 0 0   8 1.92 2.54 82.1 -2.46 -0.53 24.6 89 9 8 15 3 0 2 0  SO4 1301 A SO4 1197 B 9 1.89 2.05 82.3 -1.24 -0.17 14.5 81 8 6 8 2 4 3 0   10 2.12 2.22 83.0 -2.21 -0.47 25.5 88 10 11 16 3 0 1 0  MES 1204 B 11 1.28 1.31 83.6 -2.04 -0.45 23.3 87 9 9 12 8 0 2 0  SO4 1299 A 12 2.62 3.11 88.0 -2.26 -0.52 25.4 88 9 12 17 5 1 1 0  SO4 1301 A SO4 1197 B MES 1204 B 13 1.27 1.31 89.5 -1.84 -0.39 20.8 85 10 8 13 10 2 2 0  SO4 1299 A 14 1.98 2.62 88.9 -2.01 -0.42 23.2 85 11 10 16 5 2 1 0  MES 1204 B 15 1.29 1.55 89.9 -1.13 -0.12 22.2 83 9 10 5 11 4 0 0   16 1.22 1.42 90.7 -2.09 -0.51 22.8 87 12 8 14 9 1 2 0  SO4 1299 A 17 1.37 1.39 96.8 -2.22 -0.52 25.9 88 11 12 14 9 0 2 0  SO4 1299 A SO4 1301 A SO4 1197 B 18 1.89 2.06 100.2 -1.55 -0.23 20.5 80 12 10 10 4 5 2 0  MES 1204 B 19 1.24 3.05 100.0 -1.54 -0.28 23.2 87 8 8 8 9 4 0 0  MES 1204 B 20 1.77 2.57 103.4 -2.36 -0.50 30.5 83 14 16 8 7 2 0 0   21 1.52 1.55 111.2 -2.18 -0.45 20.8 85 10 11 23 3 7 2 0  SO4 1301 A MES 1204 B 22 1.33 1.47 122.9 -2.29 -0.50 24.3 86 16 12 20 8 5 2 0  SO4 1299 A SO4 1301 A 23 1.46 2.61 125.9 -2.25 -0.51 26.6 86 14 14 10 7 3 0 0   24 1.17 1.38 134.7 -2.15 -0.51 21.6 87 12 11 18 10 1 2 0  SO4 1299 A 25 1.73 2.80 183.4 -1.26 -0.28 17.3 86 15 9 17 12 6 2 0  SO4 1198 B 26 1.93 2.29 197.0 -1.66 -0.39 21.6 88 17 14 18 12 4 2 0  SO4 1301 A SO4 1197 B SO4 1198 B Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.