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PDBsum entry 3up7
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Tunnel analysis for: 3up7 calculated with  MOLE 2.0
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PDB id
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3up7
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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1 tunnel,
coloured by tunnel radius |
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5 tunnels,
coloured by
tunnel radius
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5 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.29 |
2.18 |
21.1 |
-0.10 |
-0.08 |
15.9 |
73 |
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3 |
2 |
1 |
6 |
1 |
0 |
0 |
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0C9 1 A
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2 |
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1.28 |
2.01 |
24.2 |
0.53 |
0.09 |
11.9 |
75 |
3 |
1 |
1 |
7 |
0 |
0 |
0 |
0C9 1 A
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3 |
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1.28 |
2.51 |
25.2 |
0.73 |
0.17 |
9.0 |
71 |
2 |
1 |
1 |
8 |
1 |
0 |
0 |
0C9 1 A
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4 |
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1.30 |
2.23 |
30.1 |
-0.38 |
-0.06 |
18.4 |
73 |
4 |
3 |
2 |
6 |
1 |
0 |
1 |
0C9 1 A
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5 |
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2.07 |
2.38 |
30.5 |
-1.74 |
-0.18 |
31.0 |
96 |
3 |
1 |
2 |
3 |
0 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program