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PDBsum entry 3ula

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 3ula calculated with MOLE 2.0 PDB id
3ula
Pores calculated on whole structure Pores calculated excluding ligands

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5 pores, coloured by radius 6 pores, coloured by radius 6 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.04 3.24 41.3 -2.25 -0.53 28.1 82 7 4 5 3 1 0 0  
2 3.43 4.66 59.8 -2.37 -0.42 27.9 82 7 5 5 3 1 1 0  
3 2.04 3.19 64.7 -1.73 -0.45 22.3 89 7 4 7 5 0 1 0  
4 2.06 2.68 78.2 -1.17 -0.25 20.1 88 7 4 7 9 0 1 0  
5 3.30 4.22 80.6 -1.64 -0.24 24.1 82 8 6 6 7 1 1 0  
6 1.24 2.29 111.2 0.07 0.09 15.2 71 6 4 3 11 2 2 1  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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