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PDBsum entry 3ujt

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 3ujt calculated with MOLE 2.0 PDB id
3ujt
Pores calculated on whole structure Pores calculated excluding ligands

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6 pores, coloured by radius 6 pores, coloured by radius 6 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.37 1.69 26.4 -0.67 -0.34 5.3 77 0 2 2 2 0 4 0  
2 1.37 2.75 85.9 -1.38 -0.45 12.0 83 4 3 8 3 3 3 0  
3 1.48 2.58 90.3 -1.18 -0.50 15.1 86 4 5 8 4 1 2 0  
4 1.37 2.61 110.6 -1.26 -0.38 10.5 85 4 2 13 4 4 4 0  
5 1.38 2.63 142.0 -1.58 -0.55 15.1 84 6 5 8 4 3 3 0  
6 1.41 1.66 162.3 -1.88 -0.54 17.9 85 9 4 10 5 3 3 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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