PDBsum entry 3uir Go to PDB code:  Tunnel analysis for: 3uir calculated with MOLE 2.0 PDB id 3uir Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.58 1.84 16.7 -0.69 -0.70 9.7 84 2 2 0 1 0 0 0   2 1.58 1.85 26.3 -1.12 -0.62 17.4 85 3 3 1 2 1 0 0   3 1.24 1.82 16.8 0.93 0.26 12.1 75 2 1 2 5 0 0 2   4 1.21 1.91 18.4 0.58 0.20 12.1 79 2 1 3 5 0 0 2   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.