spacer
spacer

PDBsum entry 3uck

Go to PDB code: 
Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 3uck calculated with MOLE 2.0 PDB id
3uck
Tunnels calculated on whole structure Tunnels calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
10 tunnels, coloured by tunnel radius 10 tunnels, coloured by tunnel radius 10 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 1.64 10.7 -0.29 0.30 3.4 75 1 0 0 2 2 0 0  
2 1.25 5.1 -0.84 -0.20 23.9 79 1 1 0 3 0 0 0  
3 1.76 6.7 0.70 0.00 6.2 79 1 1 0 3 0 0 0  
4 1.68 11.5 0.68 0.30 11.1 79 1 1 0 3 0 0 0  
5 1.40 9.1 -1.03 0.28 18.4 72 2 1 0 2 1 1 0  
6 1.42 10.6 -0.93 0.18 14.9 73 2 1 0 2 1 1 0  
7 1.36 11.5 -1.03 0.20 16.7 67 2 1 0 2 1 1 0  
8 1.53 10.5 -1.02 -0.22 23.5 74 1 1 0 2 0 1 0  
9 1.53 10.8 -1.31 -0.30 25.9 74 1 1 0 2 0 1 0  
10 1.42 8.8 2.01 0.63 10.9 80 1 1 0 3 0 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
spacer
spacer