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PDBsum entry 3ucj

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 3ucj calculated with MOLE 2.0 PDB id
3ucj
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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11 tunnels, coloured by tunnel radius 16 tunnels, coloured by tunnel radius 16 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 1.66 10.5 -0.86 -0.02 16.2 70 1 2 1 2 1 0 0  
2 1.93 12.6 -1.13 -0.36 19.8 80 2 1 1 3 1 0 0  
3 1.53 14.0 -1.24 -0.34 23.1 76 3 1 1 4 1 0 0  
4 2.01 19.9 -0.80 -0.05 16.6 84 2 2 2 4 1 0 0  
5 1.97 21.4 -0.63 -0.16 16.5 83 2 2 2 4 1 0 0  
6 2.00 16.4 0.75 0.53 3.2 76 1 0 0 4 3 0 1  229 AZM A
7 1.72 18.0 -0.55 0.14 6.3 74 2 1 2 3 3 0 1  229 AZM A,231 GOL A
8 1.37 19.9 -0.18 0.28 11.8 77 1 2 0 4 3 0 1  229 AZM A
9 1.43 14.9 -0.59 0.10 7.2 72 2 1 2 2 3 0 1  229 AZM B,230 GOL B
10 2.02 16.2 0.70 0.56 3.2 76 1 0 0 4 3 0 1  229 AZM B
11 1.42 6.2 0.05 -0.56 4.1 64 1 1 0 2 0 0 0  
12 1.44 8.5 0.06 -0.51 5.8 64 0 1 0 2 0 0 0  
13 1.34 12.2 0.37 -0.08 9.4 68 1 1 0 3 0 0 0  
14 1.84 8.4 0.15 0.04 20.3 80 2 2 0 4 0 0 0  
15 1.47 10.9 -0.90 0.28 16.1 67 2 1 0 2 1 1 0  
16 1.51 11.5 -0.82 0.23 15.2 66 2 0 0 2 1 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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