PDBsum entry 3ubu

Toxin

PDB id: 3ubu

Contents

Protein chains

130 a.a.

126 a.a.

Ligands

SO4

GOL ×3

Waters ×135

PDB id:

3ubu

Name:

Toxin

Title:

Crystal structure of agkisacucetin, a gpib-binding snaclec (snakE C- type lectin) that inhibits platelet

Structure:

Agglucetin subunit alpha-1. Chain: a. Agglucetin subunit beta-2. Chain: b. Synonym: antithrombin 1 chain b

Source:

Deinagkistrodon acutus. Hundred-pace snake. Organism_taxid: 36307. Organism_taxid: 36307

Resolution:

1.91Å R-factor: 0.193 R-free: 0.222

Authors:

Y.Gao,H.Ge,H.Chen,H.Li,Y.Liu,L.Niu,M.Teng

Key ref:

Y.Gao et al. (2012). Crystal structure of agkisacucetin, a Gpib-binding snake C-type lectin that inhibits platelet adhesion and aggregation. Proteins, 80, 1707-1711. PubMed id: 22447656

Date:

25-Oct-11 Release date: 11-Apr-12

Protein chain

Q8JIV9  (SLA1_DEIAC) -  Snaclec agglucetin subunit alpha-1 from Deinagkistrodon acutus

Seq: 154 a.a.

Struc: 130 a.a.*

Protein chain

Q8AYA3  (SLB2_DEIAC) -  Snaclec agglucetin subunit beta-2 from Deinagkistrodon acutus

Seq: 149 a.a.

Struc: 126 a.a.*

* PDB and UniProt seqs differ at 4 residue positions (black crosses)

Proteins 80:1707-1711 (2012)

PubMed id: 22447656

Crystal structure of agkisacucetin, a Gpib-binding snake C-type lectin that inhibits platelet adhesion and aggregation.

Y.Gao, H.Ge, H.Chen, H.Li, Y.Liu, L.Chen, X.Li, J.Liu, L.Niu, M.Teng.

ABSTRACT

No abstract given.