PDBsum entry 3u94 Go to PDB code:  Tunnel analysis for: 3u94 calculated with MOLE 2.0 PDB id 3u94 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   10 tunnels, coloured by tunnel radius 8 tunnels, coloured by tunnel radius 8 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.58 2.13 29.7 -2.25 -0.53 29.6 74 5 2 1 1 2 0 0   2 1.59 2.25 36.2 -2.47 -0.49 33.0 80 5 3 2 2 2 0 0   3 2.09 2.30 39.7 -2.15 -0.81 20.3 86 3 3 4 1 1 1 0  ZN 260 C 4 2.08 3.12 40.0 -2.01 -0.54 21.7 83 5 3 3 5 1 0 0   5 1.93 1.93 41.5 -2.06 -0.78 19.5 86 3 3 4 1 1 1 0  ZN 260 D 6 1.90 1.98 41.8 -1.91 -0.53 21.2 83 4 4 2 3 1 1 0   7 1.30 1.31 20.5 -1.11 -0.14 12.8 80 1 2 2 5 1 0 0  GLU 258 D 8 1.42 1.44 23.3 -1.01 -0.15 12.7 77 2 2 2 4 1 0 0  GLU 258 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.