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PDBsum entry 3u51
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Pore analysis for: 3u51 calculated with  MOLE 2.0
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PDB id
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3u51
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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4 pores,
coloured by radius |
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5 pores,
coloured by radius
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5 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.13 |
1.36 |
46.4 |
-0.59 |
-0.30 |
10.8 |
74 |
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2 |
2 |
4 |
4 |
3 |
1 |
1 |
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FUM 1 D P4E 2 D ALC 3 D 08M 4 D DAB 5 D NH2 6 D
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2 |
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1.16 |
1.25 |
49.3 |
-0.75 |
-0.41 |
13.4 |
79 |
4 |
3 |
4 |
4 |
3 |
0 |
1 |
FUM 1 D P4E 2 D ALC 3 D 08M 4 D DAB 5 D NH2 6 D
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3 |
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3.10 |
3.21 |
69.6 |
-0.85 |
-0.33 |
12.4 |
81 |
2 |
6 |
6 |
4 |
4 |
2 |
1 |
FUM 1 D P4E 2 D ALC 3 D 08M 4 D DAB 5 D NH2 6 D
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4 |
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1.14 |
1.35 |
74.8 |
-0.20 |
-0.11 |
8.4 |
74 |
2 |
4 |
4 |
6 |
6 |
2 |
0 |
P4E 2 D ALC 3 D
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5 |
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1.16 |
1.29 |
37.9 |
-0.75 |
-0.29 |
13.4 |
74 |
4 |
1 |
2 |
4 |
3 |
0 |
1 |
FUM 1 C P4E 2 C ALC 3 C 08M 4 C DAB 5 C
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program