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PDBsum entry 3u51
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Tunnel analysis for: 3u51 calculated with  MOLE 2.0
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PDB id
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3u51
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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4 tunnels,
coloured by tunnel radius |
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17 tunnels,
coloured by
tunnel radius
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17 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.80 |
1.80 |
16.7 |
0.16 |
0.10 |
14.2 |
71 |
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1 |
2 |
0 |
3 |
3 |
0 |
0 |
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P4E 2 C ALC 3 C
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2 |
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1.81 |
1.81 |
18.2 |
-0.46 |
-0.10 |
17.1 |
74 |
2 |
1 |
1 |
3 |
2 |
0 |
1 |
FUM 1 C P4E 2 C ALC 3 C 08M 4 C DAB 5 C
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3 |
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1.25 |
1.27 |
18.7 |
1.01 |
0.27 |
7.9 |
72 |
1 |
1 |
0 |
4 |
1 |
0 |
0 |
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4 |
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1.50 |
2.10 |
19.0 |
0.56 |
0.27 |
13.0 |
75 |
1 |
2 |
0 |
4 |
3 |
0 |
0 |
P4E 2 C ALC 3 C
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5 |
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1.16 |
1.26 |
19.2 |
-1.52 |
-0.65 |
8.5 |
68 |
2 |
0 |
1 |
1 |
1 |
0 |
0 |
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6 |
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1.90 |
1.91 |
20.3 |
-0.29 |
-0.36 |
13.2 |
82 |
1 |
2 |
1 |
5 |
1 |
0 |
0 |
FUM 1 C P4E 2 C ALC 3 C 08M 4 C DAB 5 C NH2 6 C
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7 |
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1.50 |
2.13 |
20.5 |
-0.09 |
0.07 |
15.9 |
77 |
2 |
1 |
1 |
4 |
2 |
0 |
1 |
FUM 1 C P4E 2 C ALC 3 C 08M 4 C DAB 5 C
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8 |
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1.51 |
2.10 |
22.5 |
-0.36 |
-0.41 |
13.6 |
84 |
1 |
2 |
1 |
6 |
1 |
0 |
0 |
FUM 1 C P4E 2 C ALC 3 C 08M 4 C DAB 5 C NH2 6 C
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9 |
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1.20 |
1.22 |
25.2 |
-0.73 |
-0.43 |
12.1 |
72 |
1 |
1 |
2 |
4 |
0 |
0 |
0 |
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10 |
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1.15 |
1.25 |
25.8 |
-0.45 |
-0.29 |
6.9 |
67 |
2 |
0 |
1 |
3 |
2 |
0 |
0 |
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11 |
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1.90 |
1.92 |
27.2 |
0.05 |
-0.06 |
11.5 |
74 |
1 |
2 |
0 |
2 |
4 |
0 |
0 |
P4E 2 C ALC 3 C
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12 |
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1.92 |
2.02 |
28.0 |
-0.23 |
-0.12 |
12.7 |
73 |
2 |
1 |
1 |
4 |
3 |
0 |
1 |
FUM 1 C P4E 2 C ALC 3 C 08M 4 C DAB 5 C
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13 |
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1.92 |
2.03 |
28.3 |
-0.64 |
-0.23 |
14.4 |
76 |
2 |
1 |
1 |
2 |
3 |
0 |
1 |
FUM 1 C P4E 2 C ALC 3 C 08M 4 C DAB 5 C
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14 |
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1.16 |
1.24 |
33.4 |
-0.29 |
-0.04 |
10.5 |
74 |
3 |
0 |
1 |
4 |
2 |
0 |
0 |
ALC 3 C
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15 |
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1.17 |
1.23 |
35.6 |
-0.04 |
0.04 |
9.2 |
77 |
3 |
0 |
1 |
5 |
2 |
0 |
0 |
ALC 3 C
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16 |
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1.90 |
1.99 |
36.0 |
0.12 |
-0.17 |
11.9 |
73 |
1 |
2 |
1 |
7 |
4 |
0 |
0 |
FUM 1 C P4E 2 C ALC 3 C 08M 4 C DAB 5 C
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17 |
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1.89 |
1.98 |
36.4 |
-0.12 |
-0.26 |
12.9 |
76 |
1 |
2 |
1 |
5 |
4 |
0 |
0 |
FUM 1 C P4E 2 C ALC 3 C 08M 4 C DAB 5 C
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program