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PDBsum entry 3tzi

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Top Page protein ligands Protein-protein interface(s) clefts links
Cleft analysis for: 3tzi PDB id
3tzi
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Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 16657.73 1.20 71.45 3 13.10 2 17.69 2 45 32 61 66 45 39 4 ACD 1[A], BOG 703[A], ACD 1[B]
(45 atoms)
2 13879.27 0.00 78.41 1 13.84 1 18.81 1 47 33 59 44 32 38 10 COH 619[A], NAG 671[A], NAG 672[A],
BOG 703[A], AKR 10[A], NAG 671[B],
NAG 672[B], EDO 4[B], EDO 6[B]
(98 atoms)
3 2883.52 0.00 71.78 2 12.72 3 13.31 3 10 5 12 17 9 2 0 COH 619[B], EDO 8[B] (47 atoms)
4 2104.31 0.00 63.25 5 6.59 8 8.72 5 10 5 12 5 6 6 0  
5 1163.53 0.00 66.97 4 7.31 5 11.59 4 4 8 5 6 3 3 1 EDO 2[A] (4 atoms)
6 679.22 0.00 58.82 8 7.22 7 7.36 9 2 3 2 4 1 4 0  
7 567.84 0.00 54.77 9 5.11 10 8.59 6 2 2 2 2 1 1 0  
8 559.41 0.00 59.87 7 7.36 4 7.45 8 1 1 6 1 1 1 0  
9 587.25 0.00 61.25 6 7.27 6 8.58 7 2 2 2 4 1 4 0  
10 524.81 0.00 53.36 10 5.49 9 7.08 10 2 2 2 2 1 1 0  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
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