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PDBsum entry 3tw5

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Top Page protein ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 3tw5 calculated with MOLE 2.0 PDB id
3tw5
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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11 tunnels, coloured by tunnel radius 14 tunnels, coloured by tunnel radius 14 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 2.24 4.3 -0.74 -0.44 5.2 70 1 0 1 0 2 0 0  
2 1.30 6.8 0.29 -0.21 1.6 86 0 0 0 2 1 1 0  
3 1.45 9.3 -0.86 -0.34 6.6 93 1 1 3 2 0 0 0  
4 1.97 5.7 0.49 0.27 8.9 80 1 0 0 1 1 1 0  
5 1.73 6.9 0.35 0.45 3.9 71 1 0 0 1 2 1 0  
6 1.60 10.4 -0.90 0.07 10.2 66 1 0 1 0 3 0 0  
7 1.57 7.2 -1.45 -0.66 19.0 88 1 1 1 1 0 1 0  
8 1.09 7.5 1.02 0.20 3.7 84 1 0 1 2 0 1 0  
9 1.58 11.3 -1.43 -0.44 5.6 78 1 1 3 0 1 0 0  
10 1.58 14.2 -1.63 -0.48 6.6 81 1 0 3 0 1 0 0  
11 1.32 7.8 -0.43 -0.08 2.2 72 0 0 2 1 1 1 0  
12 2.06 4.2 -0.97 -0.36 18.2 78 2 1 0 1 1 0 0  
13 1.42 11.0 -1.54 -0.48 9.7 78 1 1 3 0 1 0 0  
14 1.52 7.0 -0.25 -0.64 3.0 94 0 0 1 2 0 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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