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PDBsum entry 3tgx

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Pore analysis for: 3tgx calculated with MOLE 2.0 PDB id
3tgx
Pores calculated on whole structure Pores calculated excluding ligands

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12 pores, coloured by radius 9 pores, coloured by radius 9 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.43 1.43 96.7 -1.42 -0.61 17.5 90 7 6 8 5 1 0 0  SO4 310 E SO4 313 E SO4 305 M SO4 309 M
2 1.12 1.23 101.6 -1.61 -0.58 19.4 85 7 7 10 8 3 3 0  SO4 309 M
3 1.20 1.36 107.5 -1.42 -0.65 18.5 87 6 9 9 7 2 3 0  SO4 310 E SO4 313 E SO4 305 M SO4 309 M
4 1.05 1.20 124.1 -1.52 -0.53 13.6 83 6 5 10 5 2 1 0  
5 1.22 1.24 184.7 -1.74 -0.62 18.1 89 10 10 13 6 1 1 0  SO4 310 E SO4 313 E SO4 305 M SO4 309 M
6 1.52 1.73 25.3 -1.72 -0.50 25.8 85 4 2 3 1 0 0 0  
7 2.94 3.05 36.1 -0.41 -0.32 12.9 88 3 2 5 3 0 0 0  
8 2.74 2.81 40.4 -1.34 -0.54 12.7 72 1 2 3 5 0 2 0  
9 1.96 2.93 72.0 -1.33 -0.33 18.5 80 3 5 10 6 1 2 0  MAN 307 C

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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