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PDBsum entry 3tdb

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Tunnel analysis for: 3tdb calculated with MOLE 2.0 PDB id
3tdb
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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2 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 2.44 3.8 -1.58 -0.54 16.5 87 1 0 1 2 0 0 0  300 PE4 A
2 1.81 4.3 -0.91 -0.50 15.3 68 0 1 1 2 1 0 0  
3 1.89 8.2 -0.55 -0.35 8.3 92 1 0 2 2 0 1 0  300 PE4 A
4 2.18 8.6 -1.76 -0.55 17.0 85 1 1 1 2 0 0 0  300 PE4 A
5 3.40 3.3 -2.86 -0.68 31.6 92 2 2 1 0 0 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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