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Ligand clusters for UniProt code Q13526

Ligand clusters for Q13526: Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 OS=Homo sapiens GN=PIN1 PE=1 SV=1

6 ligand clusters
Cluster 1.
35 ligand types
47 ligands
Cluster 2.
15 ligand types
38 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
2 ligands
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 1f8aB  
 

Structures

PDB   Schematic diagram
1f8aB    
2zr5A    
2zr6A    
1pinA    
2zquA    
 more ...

 

 Cluster 1 contains 35 ligand types (of which only 20 are listed. Click for all)

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Ligand Description


 
1. Ligand: 1PE × 2
Pentaethylene glycol
PDB codes: 1zcn(A), 2f21(A).


 
2. Ligand: SO4 × 11
Sulfate ion
PDB codes: 1nmw(A), 1pin(A), 2zqs(A), 2zqt(A), 2zqu(A), 2zqv(A), 2zr4(A), 2zr5(A), 2zr6(A), 3kab(A), 3oob(A).


 
3. Ligand: PE4 × 2
2-{2-[2-(2-{2-[2-(2-Ethoxy-Ethoxy)-Ethoxy]-Ethoxy}- Ethoxy)-Ethoxy]-Ethoxy}-Ethanol
PDB codes: 3oob(A),


 
4. Ligand: 39X × 1
3-(6-Fluoro-1h-Benzimidazol-2-Yl)-N-(Naphthalen-2- Ylcarbonyl)-D-Alanine
PDB code: 4tyo(A).


 
5. Ligand: 3T5 × 1
(11alpha,16alpha)-9-Fluoro-11,17-Dihydroxy-16-Methyl-3, 20-Dioxopregna-1,4-Dien-21-
Yl dihydrogen phosphate
PDB code: 3tc5(A).


 
6. Ligand: 3TB × 1
N-[(1e,2r)-1-[(2r)-2-{[(2s)-1-Amino-5-Carbamimidamido- 1-Oxopentan-2-
Yl]carbamoyl}cyclopentylidene]-3- (Phosphonooxy)propan-2-Yl]-L-Phenylalaninamide
PDB code: 3tdb(A).


 
7. Ligand: 4BL × 1
6-Methyl-1h-Indole-2-Carboxylic acid
PDB code: 3kab(A).


 
8. Ligand: 4BX × 1
3-(1h-Benzimidazol-2-Yl)propanoic acid
PDB code: 3kac(A).


 
9. Ligand: 4BY × 1
5-Methyl-1h-Indole-2-Carboxylic acid
PDB code: 3kce(A).


 
10. Ligand: 4C0 × 1
3-(1h-Benzimidazol-2-Yl)-N-(3-Phenylpropanoyl)-D- Alanine
PDB code: 3kad(A).


 
11. Ligand: 4D7 × 1
3-(1h-Benzimidazol-2-Yl)-N-[(2-Methylfuran-3-Yl) carbonyl]-D-Alanine
PDB code: 3kag(A).


 
12. Ligand: 4D9 × 1
3-(1h-Benzimidazol-2-Yl)-N-(1-Benzothiophen-2- Ylcarbonyl)-D-Alanine
PDB code: 3kaf(A).


 
13. Ligand: 4DH × 1
3-(1h-Benzimidazol-2-Yl)-N-[(1-Methyl-3-Phenyl-1h- Pyrazol-5-Yl)carbonyl]-D-Alanine
PDB code: 3kah(A).


 
14. Ligand: 4F8 × 1
2-Phenyl-1h-Imidazole-4,5-Dicarboxylic acid
PDB code: 2xp7(A).


 
15. Ligand: 4FF × 1
5-Methyl-2-Phenyl-1h-Imidazole-4-Carboxylic acid
PDB code: 2xp5(A).


 
16. Ligand: 4FI × 1
(2r)-2-[(2-Methyl-5-Phenyl-Pyrazol-3-Yl)carbonylamino]- 3-Naphthalen-2-Yl-Propanoic acid
PDB code: 3kai(A).


 
17. Ligand: 4FY × 1
4-(Morpholin-4-Ylcarbonyl)-2-Phenyl-1h- Imidazole-5-Carboxylic acid
PDB code: 2xp8(A).


 
18. Ligand: 4G2 × 1
2-(3-Chloro-Phenyl)-5-Methyl-1h-Imidazole-4- Carboxylic acid
PDB code: 2xp6(A).


 
19. Ligand: 4G5 × 1
4-[(2-Amino-2-Oxoethyl)(methyl)carbamoyl]-2- Phenyl-1h-Imidazole-5-Carboxylic acid
PDB code: 2xpa(A).


 
20. Ligand: 4G8 × 1
4-[Benzyl(carboxymethyl)carbamoyl]-2-Phenyl- 1h-Imidazole-5-Carboxylic acid
PDB code: 2xp9(A).

 + more. Press for full list
 

 

 Cluster 2 contains 15 ligand types

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Ligand Description


 
1. Ligand: NAG × 2
n-acetyl-d-glucosamine
N-Acetyl-D-Glucosamine
PDB codes: 2m9f(A), 2m9j(A).


 
2. Ligand: 1PG × 1
2-(2-{2-[2-(2-Methoxy-Ethoxy)-Ethoxy]-Ethoxy}-Ethoxy)- Ethanol
PDB code: 1pin(A).


 
3. Ligand: 1PE × 2
Pentaethylene glycol
PDB codes: 1zcn(A), 2f21(A).


 
4. Ligand: 16P × 1
3,6,9,12,15,18-Hexaoxaicosane
PDB code: 2q5a(A).


 
5. Ligand: PE4 × 1
2-{2-[2-(2-{2-[2-(2-Ethoxy-Ethoxy)-Ethoxy]-Ethoxy}- Ethoxy)-Ethoxy]-Ethoxy}-Ethanol
PDB code: 2itk(A).


 
6. Ligand: 12P × 15
Dodecaethylene glycol
PDB codes: 2xp3(A), 2xp4(A), 2xp5(A), 2xp6(A), 2xp7(A), 2xp8(A), 2xp9(A), 2xpa(A), 2xpb(A), 3kab(A), 3kad(A), 3kag(A), 3kah(A), 3kai(A), 3kce(A).


 
7. Ligand: 1PG × 5
2-(2-{2-[2-(2-Methoxy-Ethoxy)-Ethoxy]-Ethoxy}-Ethoxy)- Ethanol
PDB codes: 2zqs(A), 2zqt(A), 2zr4(A), 2zr5(A), 2zr6(A).


 
8. Ligand: PE4 × 4
2-{2-[2-(2-{2-[2-(2-Ethoxy-Ethoxy)-Ethoxy]-Ethoxy}- Ethoxy)-Ethoxy]-Ethoxy}-Ethanol
PDB codes: 3odk(A), 3oob(A), 3tcz(A), 3tdb(A).


 
9. Ligand: FLC × 1
Citrate anion
PDB code: 4gwv(A).


 
10. Ligand: GLU-GLN-PRO-LEU-TPO-PRO-VAL-THR-ASP-LEU × 1
TPO=Phosphothreonine.
PDB code: 1i8g(B).


 
11. Ligand: ILE-PRO-GLU-TPO-PRO-PRO-PRO-GLY × 1
TPO=Phosphothreonine.
PDB code: 2lb3(A).


 
12. Ligand: KDH × 1
(2r,3r)-5,7-Dihydroxy-2-(3,4,5-Trihydroxyphenyl)-3,4- Dihydro-2h-Chromen-3-Yl 3,4,5-
Trihydroxybenzoate
PDB code: 3oob(A).


 
13. Ligand: P6G × 1
Hexaethylene glycol
PDB code: 3tc5(A).


 
14. Ligand: PE8 × 1
3,6,9,12,15,18,21-Heptaoxatricosane-1,23-Diol
PDB code: 3ntp(A).


 
15. Ligand: TYR-SEP-PRO-THR-SEP-PRO-SER × 1
SEP=Phosphoserine.
PDB code: 1f8a(B).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: GIA × 1
3-Fluoro-N-(Naphthalen-2-Ylcarbonyl)-D-Phenylalanine
PDB code: 3i6c(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: 1PG × 2
2-(2-{2-[2-(2-Methoxy-Ethoxy)-Ethoxy]-Ethoxy}-Ethoxy)- Ethanol
PDB codes: 1pin(A), 2zqv(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: LMR × 1
(2s)-2-Hydroxybutanedioic acid
PDB code: 4gwt(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
Glycerol
PDB code: 4tyo(A).

 

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