PDBsum entry 3t9h Go to PDB code:  Tunnel analysis for: 3t9h calculated with MOLE 2.0 PDB id 3t9h Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   7 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.48 1.63 16.0 -1.38 -0.75 14.7 100 0 2 3 1 0 0 0   2 1.47 1.62 18.2 -1.38 -0.76 15.8 96 1 2 3 1 0 0 0   3 1.37 1.55 22.1 -1.40 -0.66 15.8 89 1 4 3 2 0 0 0   4 1.78 2.42 16.3 -2.72 -0.37 32.2 65 3 1 0 0 1 0 0   5 1.30 1.30 16.9 1.11 0.34 3.2 91 1 0 0 7 1 0 0   6 1.13 1.45 15.8 -1.40 -0.65 10.0 70 2 2 1 0 2 0 0   7 1.27 1.27 22.5 -2.46 -0.53 29.2 71 3 2 0 0 1 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.