spacer
spacer

PDBsum entry 3t85

Go to PDB code: 
Top Page protein ligands metals tunnels links
Tunnel analysis for: 3t85 calculated with MOLE 2.0 PDB id
3t85
Tunnels calculated on whole structure Tunnels calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
7 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 1.94 11.7 -1.17 -0.26 15.2 74 3 1 1 0 2 0 0  
2 1.71 14.9 -0.14 -0.04 9.4 79 1 2 1 1 2 0 0  
3 1.72 5.7 -1.70 -0.62 15.4 71 2 0 1 0 0 1 0  
4 1.83 7.0 -1.69 -0.67 11.7 74 2 0 2 0 0 1 0  
5 1.86 7.2 -2.06 -0.63 15.1 71 2 0 1 0 0 1 0  
6 1.85 8.7 -1.96 -0.66 11.7 74 2 0 2 0 0 1 0  
7 2.21 6.9 -1.27 0.02 18.9 55 2 1 0 0 3 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
spacer
spacer