spacer
spacer

PDBsum entry 3t82

Go to PDB code: 
Top Page protein ligands metals tunnels links
Tunnel analysis for: 3t82 calculated with MOLE 2.0 PDB id
3t82
Tunnels calculated on whole structure Tunnels calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
5 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 1.78 5.1 1.25 0.18 4.7 92 0 1 0 4 0 0 0  
2 1.97 5.7 0.48 0.22 6.6 59 0 1 0 0 2 0 0  
3 2.06 10.6 -1.04 -0.27 12.6 70 2 1 1 0 2 0 0  
4 1.86 7.9 -1.11 0.10 16.9 52 1 1 0 0 3 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
spacer
spacer