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PDBsum entry 3t5u

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Tunnel analysis for: 3t5u calculated with MOLE 2.0 PDB id
3t5u
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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8 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 1.89 11.8 -1.90 -0.27 16.5 92 3 0 4 1 1 1 0  263 A09 A,267 GOL A
2 1.61 12.1 -0.29 -0.09 10.5 74 1 1 1 1 2 0 0  
3 1.72 13.0 -1.56 -0.29 21.9 77 3 2 1 0 2 0 0  
4 1.93 4.7 0.45 0.84 5.5 59 1 0 0 1 3 0 0  
5 1.47 7.6 -1.87 -0.83 24.1 81 1 2 1 1 0 0 0  
6 1.59 5.5 1.24 0.17 5.0 92 0 1 0 4 0 0 0  
7 2.22 5.2 -1.12 -0.31 23.0 71 2 1 0 1 0 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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