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PDBsum entry 3t5h
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Tunnel analysis for: 3t5h calculated with  MOLE 2.0
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PDB id
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3t5h
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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12 tunnels,
coloured by tunnel radius |
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4 tunnels,
coloured by
tunnel radius
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4 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.26 |
1.26 |
24.9 |
2.16 |
0.89 |
8.9 |
89 |
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2 |
0 |
0 |
5 |
0 |
0 |
0 |
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DA 403 B DC 404 B HN1 405 B DG 406 B DA 407 B DT
512 C DC 513 C
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2 |
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1.26 |
1.26 |
27.6 |
-1.26 |
-0.10 |
26.5 |
94 |
4 |
0 |
2 |
2 |
0 |
0 |
0 |
DA 407 B DA 408 B DT 409 B DC 410 B DG 505 C DA
506 C DG 509 C DA 510 C
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3 |
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1.26 |
1.26 |
32.1 |
1.26 |
0.56 |
12.2 |
93 |
3 |
0 |
0 |
5 |
0 |
0 |
0 |
DC 404 B HN1 405 B DG 406 B DA 407 B
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4 |
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1.26 |
1.26 |
49.3 |
-0.12 |
0.28 |
16.6 |
89 |
5 |
0 |
2 |
5 |
1 |
0 |
0 |
DGT 600 A DC 404 B HN1 405 B DG 406 B DA 407 B
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program