spacer
spacer

PDBsum entry 3sob

Go to PDB code: 
protein metals Protein-protein interface(s) links
Protein binding/immune system PDB id
3sob

 

 

 

 

Loading ...

 
JSmol PyMol  
Contents
Protein chains
213 a.a.
305 a.a.
222 a.a.
Metals
_CA
Waters ×486
PDB id:
3sob
Name: Protein binding/immune system
Title: The structure of the first ywtd beta propeller domain of lrp6 in complex with a fab
Structure: Antibody light chain. Chain: l. Engineered: yes. Low-density lipoprotein receptor-related protein 6. Chain: b. Fragment: unp residues 20-335. Synonym: lrp-6. Engineered: yes. Antibody heavy chain.
Source: Homo sapiens. Human. Organism_taxid: 9606. Expressed in: spodoptera frugiperda. Expression_system_taxid: 7108. Gene: lrp6. Expressed in: escherichia coli. Expression_system_taxid: 562. Expression_system_taxid: 562
Resolution:
1.90Å     R-factor:   0.176     R-free:   0.212
Authors: W.Wang,E.Bourhis,C.Tam,Y.Zhang,L.Rouge,Y.Wu,Y.Franke,A.G.Cochran
Key ref: E.Bourhis et al. (2011). Wnt antagonists bind through a short peptide to the first β-propeller domain of LRP5/6. Structure, 19, 1433-1442. PubMed id: 21944579
Date:
30-Jun-11     Release date:   21-Sep-11    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chain
No UniProt id for this chain
Struc: 213 a.a.
Protein chain
O75581  (LRP6_HUMAN) -  Low-density lipoprotein receptor-related protein 6 from Homo sapiens
Seq:
Struc:
 
Seq:
Struc:
 
Seq:
Struc:
 
Seq:
Struc:
1613 a.a.
305 a.a.
Protein chain
No UniProt id for this chain
Struc: 222 a.a.
Key:    Secondary structure  CATH domain

 

 
Structure 19:1433-1442 (2011)
PubMed id: 21944579  
 
 
Wnt antagonists bind through a short peptide to the first β-propeller domain of LRP5/6.
E.Bourhis, W.Wang, C.Tam, J.Hwang, Y.Zhang, D.Spittler, O.W.Huang, Y.Gong, A.Estevez, I.Zilberleyb, L.Rouge, C.Chiu, Y.Wu, M.Costa, R.N.Hannoush, Y.Franke, A.G.Cochran.
 
  ABSTRACT  
 
The Wnt pathway inhibitors DKK1 and sclerostin (SOST) are important therapeutic targets in diseases involving bone loss or damage. It has been appreciated that Wnt coreceptors LRP5/6 are also important, as human missense mutations that result in bone overgrowth (bone mineral density, or BMD, mutations) cluster to the E1 propeller domain of LRP5. Here, we report a crystal structure of LRP6 E1 bound to an antibody, revealing that the E1 domain is a peptide recognition module. Remarkably, the consensus E1 binding sequence is a close match to a conserved tripeptide motif present in all Wnt inhibitors that bind LRP5/6. We show that this motif is important for DKK1 and SOST binding to LRP6 and for inhibitory function, providing a detailed structural explanation for the effect of the BMD mutations.
 

 

spacer

spacer