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PDBsum entry 3sl4

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 3sl4 calculated with MOLE 2.0 PDB id
3sl4
Pores calculated on whole structure Pores calculated excluding ligands

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4 pores, coloured by radius 8 pores, coloured by radius 8 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.56 1.63 47.6 -0.73 -0.16 6.5 91 1 1 5 7 1 1 0  JN4 442 D
2 2.21 2.49 59.6 -2.09 -0.32 30.2 83 9 7 4 7 1 1 0  EDO 10 B DMS 13 D
3 2.28 2.42 68.3 -2.12 -0.33 34.9 83 12 12 2 8 0 2 0  EDO 5 A EDO 16 A EDO 10 B EDO 14 C DMS 13 D
4 2.45 2.55 81.1 -2.23 -0.39 30.4 82 11 10 6 6 1 1 0  EDO 5 A EDO 10 B DMS 10 C
5 1.29 1.51 84.0 -1.69 -0.44 21.4 85 8 9 4 7 0 1 0  EDO 10 B DMS 9 D EDO 10 D
6 1.79 1.78 87.4 -0.72 -0.15 11.5 91 3 4 7 10 1 1 0  EDO 441 A EDO 9 B EDO 11 B JN4 21 B DMS 9 D EDO
10 D
7 1.79 1.81 175.6 -2.00 -0.48 20.3 88 10 9 18 9 2 1 0  EDO 15 A EDO 11 B JN4 21 B
8 1.89 1.89 172.8 -2.26 -0.54 18.3 89 11 9 23 7 2 1 0  EDO 15 A EDO 11 B JN4 21 B

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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