PDBsum entry 3sjv Go to PDB code:  Pore analysis for: 3sjv calculated with MOLE 2.0 PDB id 3sjv Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   33 pores, coloured by radius 33 pores, coloured by radius 33 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.86 2.02 46.3 -0.96 -0.25 12.7 80 1 6 2 2 4 2 0   2 2.43 2.54 83.9 -1.29 -0.42 18.3 91 6 7 15 8 2 1 0   3 2.79 4.57 86.9 -1.83 -0.42 18.1 84 6 9 10 6 4 3 0   4 1.22 2.11 88.0 -2.89 -0.70 31.5 85 6 6 7 1 1 1 0   5 3.09 4.47 97.6 -1.46 -0.45 19.2 90 6 9 13 7 2 1 0   6 2.87 2.91 99.7 -2.53 -0.68 14.3 84 5 7 14 1 1 5 0   7 2.21 2.47 100.7 -1.72 -0.60 16.1 86 5 8 13 7 1 4 0   8 1.86 2.02 103.0 -1.59 -0.59 19.8 86 5 12 9 6 1 2 0   9 1.33 1.50 106.1 -1.46 -0.46 13.4 83 9 6 11 5 3 3 1   10 1.33 1.50 115.5 -2.07 -0.53 14.2 79 5 9 10 2 2 5 0   11 1.86 2.02 116.8 -1.75 -0.60 21.0 85 5 14 8 5 1 2 0   12 2.43 2.56 122.8 -1.77 -0.51 21.1 84 7 13 13 7 6 3 0   13 1.86 2.02 119.7 -1.74 -0.49 20.0 86 7 13 12 6 1 4 0   14 2.07 2.10 122.8 -2.25 -0.58 23.7 82 10 13 13 6 4 4 0   15 1.86 2.02 126.3 -2.37 -0.58 22.1 79 6 15 10 4 3 6 0   16 1.61 3.06 131.2 -0.94 -0.27 17.9 86 9 11 13 15 5 1 0   17 2.47 3.71 139.4 -1.84 -0.44 20.7 84 9 14 16 7 6 5 0   18 2.72 2.81 142.9 -2.08 -0.51 25.8 86 11 12 12 7 2 1 0   19 2.42 2.54 149.1 -2.18 -0.58 25.4 86 12 13 17 8 2 1 0   20 1.24 2.38 153.9 -2.03 -0.51 10.3 79 4 8 13 3 2 7 0   21 2.46 3.56 154.7 -2.09 -0.56 24.1 84 11 15 11 5 2 3 0   22 1.34 1.50 158.5 -1.86 -0.56 19.7 81 12 14 11 7 3 3 1   23 2.43 2.54 160.9 -2.15 -0.63 24.1 85 11 16 16 6 2 3 0   24 2.74 3.00 160.9 -2.56 -0.59 24.2 81 12 17 14 6 4 5 0   25 1.61 3.07 166.0 -0.66 -0.20 14.5 84 9 11 13 17 6 3 0   26 1.65 2.51 167.1 -0.75 -0.26 14.9 84 7 12 13 16 4 5 0   27 2.59 3.57 172.7 -2.51 -0.64 23.4 80 11 19 13 4 4 7 0   28 1.62 3.05 185.8 -1.12 -0.28 14.8 80 8 15 15 15 8 7 0   29 1.31 1.42 204.6 -1.82 -0.51 18.7 79 13 17 16 8 4 8 1   30 1.42 1.43 228.6 -1.00 -0.28 13.8 82 10 13 17 17 6 6 0   31 2.23 3.83 50.6 -1.36 -0.32 18.2 82 3 4 5 2 4 1 0   32 2.63 2.69 65.3 -2.18 -0.43 27.2 82 7 7 6 2 5 2 0   33 1.42 1.47 79.1 -1.80 -0.55 22.1 82 3 9 7 3 4 3 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.