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PDBsum entry 3s8g

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 3s8g calculated with MOLE 2.0 PDB id
3s8g
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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12 tunnels, coloured by tunnel radius 10 tunnels, coloured by tunnel radius 10 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 1.51 63.8 1.17 0.71 5.2 76 3 0 3 16 8 1 0  800 HEM A,801 HAS A
2 1.77 65.9 0.71 0.48 9.3 78 6 0 4 21 8 1 0  563 PER A,565 OLC A,800 HEM A,801 HAS A
3 1.70 5.1 -0.72 0.03 2.2 67 0 0 0 1 1 3 0  
4 2.35 6.9 -0.59 -0.33 2.4 65 0 0 1 3 1 1 0  
5 1.61 7.0 -0.83 -0.46 4.2 72 1 0 1 2 0 2 0  
6 1.63 7.7 -0.53 -0.56 3.9 75 1 0 1 2 0 1 0  
7 1.67 13.2 -1.37 -0.37 12.8 83 1 1 1 0 1 1 0  
8 1.30 7.1 1.43 -0.01 1.8 102 0 0 0 2 0 0 0  
9 1.56 10.0 -0.83 -0.50 4.6 71 0 1 1 1 1 0 0  
10 1.55 8.3 -0.66 -0.30 2.8 81 0 0 1 2 1 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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