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PDBsum entry 3s5p

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Top Page protein ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 3s5p calculated with MOLE 2.0 PDB id
3s5p
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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11 tunnels, coloured by tunnel radius 12 tunnels, coloured by tunnel radius 12 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 1.31 10.0 -0.60 -0.63 9.8 99 0 1 2 2 0 0 0  
2 1.38 11.2 -0.52 -0.63 8.3 99 0 1 2 2 0 0 0  
3 1.40 17.4 -0.41 -0.59 8.3 93 0 2 2 3 0 0 0  
4 1.99 4.1 1.18 -0.04 1.4 87 1 0 0 4 0 0 1  
5 1.94 6.9 -0.22 0.12 17.1 72 1 1 0 2 0 0 1  
6 2.63 7.2 -0.19 -0.15 9.2 81 1 1 1 1 0 1 1  146 SO4 A
7 1.74 5.2 -0.52 -0.24 10.4 78 1 0 1 1 1 0 0  
8 1.69 10.4 -0.15 -0.04 13.7 78 2 0 1 3 1 0 0  
9 1.94 16.4 -1.81 -0.34 26.4 89 2 1 2 1 0 0 0  
10 1.37 17.8 -1.58 -0.19 27.6 86 2 1 2 3 0 0 0  
11 1.98 7.1 -1.43 -0.30 23.0 93 2 0 2 2 0 0 0  
12 1.44 8.2 -1.30 -0.18 24.6 88 2 0 2 3 0 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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