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PDBsum entry 3s40

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Top Page protein Protein-protein interface(s) tunnels links
Tunnel analysis for: 3s40 calculated with MOLE 2.0 PDB id
3s40
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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12 tunnels, coloured by tunnel radius 9 tunnels, coloured by tunnel radius 9 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 1.46 12.2 2.78 1.03 0.6 87 0 0 1 6 2 0 0  
2 1.61 15.9 2.42 0.80 2.2 88 0 1 1 6 2 0 0  
3 1.58 12.4 2.23 0.63 1.4 69 0 0 0 4 2 1 0  
4 1.27 14.2 2.33 0.65 1.2 73 0 0 1 5 2 0 0  
5 2.30 5.4 -0.28 -0.11 10.3 93 1 0 3 1 0 0 0  
6 1.64 6.8 0.00 0.02 10.4 82 1 0 2 1 1 0 0  
7 1.67 7.0 0.35 0.19 10.4 95 1 0 2 1 0 0 0  
8 1.54 8.4 0.79 0.39 10.6 82 1 0 1 1 1 0 0  
9 1.53 4.7 0.23 -0.51 2.0 107 0 0 1 2 0 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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