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PDBsum entry 3s3j

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Tunnel analysis for: 3s3j calculated with MOLE 2.0 PDB id
3s3j
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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8 tunnels, coloured by tunnel radius 9 tunnels, coloured by tunnel radius 9 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 1.54 8.0 -0.19 0.23 11.9 70 2 1 0 3 1 0 0  
2 1.65 16.6 -0.26 -0.18 8.0 69 1 1 1 4 1 0 0  
3 1.50 20.4 -0.38 0.02 3.1 78 1 0 2 4 1 0 0  
4 1.85 5.5 0.06 -0.04 11.4 77 0 1 0 3 1 0 0  
5 3.14 5.5 -2.88 -0.91 14.8 80 0 1 2 0 0 1 0  
6 2.67 6.6 -2.64 -0.85 18.7 73 1 2 1 0 0 1 0  
7 2.05 8.1 -2.50 -0.75 3.1 82 0 0 2 0 0 2 0  
8 1.30 5.2 -1.33 -0.53 2.9 69 0 0 2 0 0 2 1  
9 2.14 7.1 -2.15 -0.71 18.8 87 2 0 1 1 0 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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