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PDBsum entry 3s3e

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Top Page protein ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 3s3e calculated with MOLE 2.0 PDB id
3s3e
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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8 tunnels, coloured by tunnel radius 10 tunnels, coloured by tunnel radius 10 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 1.94 6.3 -0.98 0.04 27.5 80 2 1 0 2 0 0 0  
2 1.58 8.8 -2.23 -0.51 22.4 84 2 1 2 0 0 0 1  
3 1.34 6.1 -0.84 -0.45 2.0 80 0 0 1 0 1 2 0  
4 1.93 9.3 -2.06 -0.29 27.2 84 3 2 2 2 0 0 0  
5 1.76 7.8 -1.10 -0.16 17.4 90 2 1 1 3 0 0 0  
6 1.65 7.2 0.58 0.65 4.3 64 1 0 0 2 4 0 0  
7 1.32 7.5 0.35 0.64 5.1 67 1 0 0 2 3 0 0  
8 1.27 8.5 -0.52 -0.38 3.6 83 0 1 2 2 0 1 0  
9 1.59 10.5 -0.08 -0.07 8.5 62 2 0 0 1 1 1 1  
10 1.79 7.3 -1.76 0.13 21.3 59 1 1 0 0 3 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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