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PDBsum entry 3s3e

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Top Page protein ligands Protein-protein interface(s) clefts links
Cleft analysis for: 3s3e PDB id
3s3e
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Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 5585.62 0.94 70.83 1 13.49 1 15.27 1 18 17 19 13 11 11 4 1BO 311[B], IPA 313[B], 1BO 314[B]
(14 atoms)
2 5919.33 0.00 66.86 2 10.76 2 11.97 2 19 15 19 17 11 14 6 IPA 310[A], 1BO 312[B] (9 atoms)
3 1293.89 0.00 62.39 5 7.38 5 8.08 4 5 6 7 4 2 4 0  
4 540.00 0.00 62.98 3 6.40 7 6.88 9 4 2 5 2 1 1 0  
5 634.08 0.00 57.01 9 8.23 3 7.19 8 5 1 4 5 0 1 0  
6 605.81 0.00 59.11 6 4.04 10 7.92 7 3 1 4 3 0 1 0  
7 753.47 0.00 54.06 10 5.37 8 8.03 5 4 3 2 4 1 1 0  
8 693.14 0.00 57.56 8 4.59 9 8.70 3 0 2 5 2 2 4 1  
9 597.80 0.00 57.98 7 7.69 4 7.99 6 5 3 0 3 2 1 0  
10 626.48 0.00 62.78 4 7.05 6 6.03 10 3 4 2 5 1 1 0  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
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