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PDBsum entry 3s39

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 3s39 calculated with MOLE 2.0 PDB id
3s39
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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10 tunnels, coloured by tunnel radius 8 tunnels, coloured by tunnel radius 8 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 1.28 20.9 0.47 0.15 15.7 84 2 3 1 6 0 1 0  
2 1.29 32.4 0.42 0.06 12.6 87 4 4 1 7 1 0 0  
3 1.57 5.7 1.89 0.23 2.6 84 0 1 0 5 0 0 0  
4 1.31 13.9 -0.94 -0.48 11.5 83 3 2 1 2 0 2 0  
5 1.31 14.5 -0.89 -0.53 10.7 83 2 2 1 2 0 2 0  
6 1.65 8.1 -0.04 0.00 2.1 67 0 0 0 1 1 3 0  
7 1.30 7.6 -0.06 0.33 17.7 74 1 1 0 3 1 0 0  
8 2.40 5.9 -1.81 -0.73 19.4 86 2 1 1 0 0 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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