PDBsum entry 3s15 Go to PDB code:  Pore analysis for: 3s15 calculated with MOLE 2.0 PDB id 3s15 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   30 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.72 2.38 29.2 -1.91 -0.44 22.3 82 4 2 3 2 1 1 0   2 1.76 1.80 56.6 -1.79 -0.34 26.1 86 9 6 5 7 1 1 0   3 2.94 3.50 68.1 -0.90 -0.49 18.3 89 4 4 4 3 0 1 0   4 1.62 2.19 72.2 -2.08 -0.40 29.6 82 12 11 5 6 2 2 0   5 1.50 2.08 116.0 -1.08 -0.35 17.7 79 8 9 6 12 7 3 0   6 1.63 1.89 127.8 -1.85 -0.37 23.9 81 14 14 6 10 4 3 0   7 1.55 1.70 143.0 -1.20 -0.27 18.8 83 8 7 7 9 2 1 0   8 1.50 2.12 149.0 -1.42 -0.19 21.5 79 14 10 6 16 10 3 0   9 1.51 1.45 145.7 -2.12 -0.46 26.1 81 15 11 8 5 5 3 0  DT 28 T 10 2.02 2.32 147.4 -1.91 -0.40 22.6 80 14 10 11 6 6 3 0   11 1.50 1.78 157.7 -1.78 -0.27 22.5 78 15 15 9 10 12 4 0   12 1.58 1.78 158.3 -2.04 -0.39 27.5 81 17 14 6 7 6 4 0   13 3.09 3.60 157.5 -2.24 -0.49 25.6 85 24 11 17 6 3 2 0   14 2.54 2.71 174.3 -1.50 -0.48 21.9 85 18 12 9 15 2 0 0  DC 4 R DG 5 R DA 6 R DA 18 T DT 19 T DA 27 T DT 28 T 15 1.55 1.71 192.4 -1.25 -0.28 19.2 81 17 15 9 16 7 4 0   16 1.73 1.71 195.2 -1.80 -0.42 25.9 82 24 12 6 14 5 3 0  DC 4 R DG 5 R DA 6 R DA 18 T DT 19 T 17 1.51 1.75 233.4 -1.69 -0.44 23.5 81 23 16 10 13 5 4 0  DC 4 R DG 5 R DA 18 T 18 1.48 1.72 230.7 -1.93 -0.44 27.1 80 30 19 5 13 6 5 0  DC 4 R DG 5 R DA 6 R DA 18 T DT 19 T 19 1.62 1.68 235.7 -2.01 -0.53 23.6 83 28 15 18 7 6 4 0  MG 2002 B DC 4 R DG 5 R DA 6 R DA 8 R DG 9 R DG 10 R DA 18 T DT 19 T DC 20 T DC 21 T 20 1.27 1.25 256.6 -1.69 -0.51 22.4 82 17 18 10 14 3 3 0  DA 18 T 21 1.31 1.28 250.7 -1.80 -0.49 23.1 82 18 15 9 14 4 2 0  DC 4 R DG 5 R DA 6 R DA 18 T DA 27 T DT 28 T 22 1.38 1.34 263.9 -1.88 -0.38 27.4 81 25 22 7 13 4 5 0  DA 18 T 23 1.37 1.34 265.1 -2.14 -0.60 23.3 85 22 17 18 9 4 3 0  MG 2002 B DA 6 R DG 9 R DG 10 R DA 18 T DT 19 T DC 20 T DC 21 T 24 1.54 1.51 270.4 -1.66 -0.48 22.5 84 26 21 13 20 5 5 0  DC 4 R DG 5 R DA 6 R DA 18 T DT 19 T 25 1.41 1.39 288.9 -1.68 -0.40 23.3 81 27 18 8 17 6 5 0  DC 4 R DG 5 R DA 6 R DA 18 T 26 1.36 1.50 299.8 -1.74 -0.41 24.6 81 30 23 10 20 7 5 0  DC 4 R DG 5 R DA 6 R DA 18 T DT 19 T 27 1.44 1.79 311.2 -1.70 -0.43 24.3 81 34 25 9 24 8 6 0  DC 4 R DG 5 R DA 6 R DA 18 T DT 19 T 28 1.21 1.64 333.0 -1.68 -0.37 24.8 82 25 26 12 19 5 5 0  DA 18 T 29 1.16 1.32 325.7 -1.88 -0.47 24.6 81 27 21 9 17 6 5 0  DC 4 R DG 5 R DA 6 R DA 18 T 30 1.42 1.42 344.4 -1.68 -0.41 24.7 82 29 28 11 24 7 6 0  DA 18 T Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.