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PDBsum entry 3ryx

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Cleft analysis for: 3ryx PDB id
3ryx
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Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 2009.39 1.98 60.85 8 12.19 1 12.52 1 8 4 5 2 4 8 0  
2 1017.14 0.00 71.88 2 9.47 3 7.31 7 5 3 7 11 6 2 0 RYX 1[B] (19 atoms)
3 1101.94 0.00 55.01 10 5.39 10 8.50 2 6 3 3 5 3 3 0  
4 969.47 0.00 65.42 4 7.96 5 7.01 8 5 3 6 2 2 5 0  
5 709.17 0.00 63.03 7 6.10 8 7.83 4 3 4 4 5 1 2 0  
6 509.62 0.00 56.43 9 5.55 9 7.63 5 4 0 2 3 3 0 0  
7 472.08 0.00 63.12 6 10.95 2 6.67 9 5 1 1 0 3 0 0  
8 403.73 0.00 66.17 3 8.88 4 8.43 3 2 2 5 1 2 0 0  
9 409.64 0.00 74.18 1 6.37 7 7.52 6 5 1 2 2 0 4 0  
10 341.72 0.00 64.37 5 7.13 6 6.40 10 1 3 2 3 2 2 0  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
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