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PDBsum entry 3ryp

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 3ryp calculated with MOLE 2.0 PDB id
3ryp
Pores calculated on whole structure Pores calculated excluding ligands

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1 pore, coloured by radius 2 pores, coloured by radius 2 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.44 1.64 26.8 0.59 -0.01 7.1 90 2 1 5 6 0 0 0  CMP 401 B
2 1.20 1.12 236.8 -2.18 -0.63 26.2 84 16 14 9 4 0 1 1  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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