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PDBsum entry 3ryj

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Cleft analysis for: 3ryj PDB id
3ryj
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Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 1826.72 1.84 59.95 8 11.68 1 11.84 1 7 4 5 2 4 8 0  
2 993.94 0.00 71.28 2 10.15 3 7.63 5 5 3 5 11 4 3 0 RYJ 1[B] (17 atoms)
3 1053.00 0.00 65.64 3 8.05 5 6.28 8 5 3 6 2 2 5 0  
4 819.70 0.00 54.45 10 6.18 8 8.46 3 3 2 2 4 0 5 0  
5 1067.77 0.00 65.49 4 10.06 4 6.64 7 6 4 6 6 2 3 0  
6 486.84 0.00 55.08 9 5.82 9 8.39 4 4 0 2 2 3 0 0  
7 392.34 0.00 64.51 6 10.33 2 8.59 2 2 2 5 1 2 1 0  
8 371.67 0.00 72.59 1 6.82 6 0.00 10 4 1 2 2 1 3 0  
9 315.56 0.00 65.17 5 6.60 7 6.79 6 1 2 2 3 2 2 0  
10 327.80 0.00 62.47 7 4.33 10 5.83 9 2 4 4 1 0 1 0  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
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