PDBsum entry 3rug Go to PDB code:  Pore analysis for: 3rug calculated with MOLE 2.0 PDB id 3rug Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   15 pores, coloured by radius 12 pores, coloured by radius 12 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.20 1.28 27.9 -1.39 -0.21 13.1 75 2 2 0 0 3 1 0   2 2.78 2.97 35.5 -1.70 -0.47 17.5 88 4 2 4 1 2 2 0   3 2.25 2.44 41.7 -0.55 -0.34 7.6 94 2 3 7 4 0 0 0   4 1.09 1.45 65.4 -1.45 -0.56 11.2 90 4 3 12 3 2 0 0  DB6 303 A DB6 303 C 5 1.31 1.58 76.6 -1.19 -0.38 13.3 80 4 2 8 5 5 1 0   6 1.29 1.64 82.2 -1.38 -0.37 15.7 85 5 4 12 6 5 0 0  DB6 303 A NAG 1 I NAG 2 I 7 1.87 2.19 83.8 -1.72 -0.25 14.2 74 7 2 12 4 8 3 0  DB6 303 A 8 2.80 2.99 90.6 -1.53 -0.56 18.6 94 5 4 11 5 0 1 0  NAG 1 I NAG 2 I 9 2.07 4.41 98.2 -1.88 -0.06 19.8 69 9 5 6 3 11 4 0   10 1.86 2.15 108.0 -1.64 -0.18 17.9 78 9 7 12 7 9 3 0  NAG 1 I NAG 2 I 11 1.94 1.93 107.8 -2.02 -0.17 20.1 73 9 5 12 4 10 3 0  DB6 303 A 12 1.29 1.68 161.1 -1.94 -0.45 18.0 81 8 9 20 4 10 2 0  NAG 1 I NAG 2 I Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.