PDBsum entry 3rtr Go to PDB code:  Pore analysis for: 3rtr calculated with MOLE 2.0 PDB id 3rtr Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   17 pores, coloured by radius 17 pores, coloured by radius 17 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 3.12 4.60 26.1 -3.05 -0.62 21.0 86 7 1 7 0 0 1 0   2 2.06 2.24 27.7 -2.27 -0.50 20.0 82 3 3 6 3 0 1 1   3 2.02 2.24 28.0 -2.20 -0.51 21.8 81 4 4 5 3 0 1 1   4 2.02 2.02 41.9 -2.79 -0.49 25.1 84 6 3 5 1 0 1 0   5 2.56 5.03 60.1 -1.55 -0.39 14.0 89 4 2 10 3 4 0 0   6 2.98 3.10 87.2 -2.00 -0.57 18.4 85 7 7 10 3 3 0 1   7 2.89 3.89 87.4 -2.51 -0.55 33.0 80 7 9 1 3 1 1 0   8 1.28 1.29 89.4 -2.02 -0.50 23.9 82 9 8 8 8 1 0 0   9 1.64 1.67 94.2 -2.12 -0.49 20.5 85 9 7 10 5 3 0 0   10 1.14 1.38 96.7 -1.86 -0.32 29.3 77 14 11 1 9 1 2 0   11 1.55 1.98 98.7 -2.65 -0.46 30.1 79 17 10 7 3 2 2 0   12 1.23 1.37 109.3 -1.42 -0.39 18.0 83 7 8 7 12 2 0 1   13 1.28 1.28 109.2 -2.41 -0.54 32.6 78 15 13 2 8 0 2 0   14 1.26 1.84 127.6 -1.51 -0.48 20.6 79 7 10 7 8 0 1 1   15 1.30 1.87 152.9 -1.20 -0.38 14.7 84 6 8 13 10 3 1 1   16 1.22 1.21 182.3 -1.55 -0.41 17.4 82 16 8 17 9 6 0 2   17 1.20 1.19 194.1 -0.92 -0.26 17.6 81 14 9 10 17 6 0 1   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.