PDBsum entry 3rly Go to PDB code:  Tunnel analysis for: 3rly calculated with MOLE 2.0 PDB id 3rly Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   2 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.14 1.53 24.8 -1.00 -0.70 14.4 62 1 3 0 1 1 0 1  S29 1 H S29 2 H 2 1.14 1.54 29.6 -0.61 -0.29 8.9 65 1 2 1 3 3 0 0  S29 1 H S29 2 H 3 1.35 1.56 22.0 -0.13 0.12 9.5 80 3 0 1 6 3 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.