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PDBsum entry 3rgp

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Top Page protein ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 3rgp calculated with MOLE 2.0 PDB id
3rgp
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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13 tunnels, coloured by tunnel radius 12 tunnels, coloured by tunnel radius 12 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 1.48 41.3 0.00 -0.03 9.4 79 2 2 3 7 3 1 1  
2 1.42 42.4 -0.56 -0.24 10.5 82 3 3 5 7 3 1 0  
3 1.48 44.9 -0.51 -0.16 9.8 82 3 3 5 6 3 1 0  
4 1.41 45.4 -0.28 -0.44 9.0 86 2 4 3 7 2 1 0  
5 1.49 49.0 -0.01 -0.21 9.7 83 1 4 5 8 2 2 0  
6 1.49 50.2 -0.05 -0.27 8.8 85 3 4 4 5 2 2 0  
7 1.45 51.3 -0.15 -0.32 8.8 87 1 4 4 6 2 2 0  
8 1.38 10.8 -1.76 -0.39 23.2 87 2 2 3 4 0 0 0  
9 2.02 8.4 -0.11 -0.43 7.9 92 2 0 0 2 0 0 0  
10 1.83 8.8 -0.17 -0.30 10.3 86 1 1 1 1 1 0 0  
11 1.48 16.9 -2.93 -0.16 22.8 76 3 0 1 0 1 1 0  
12 1.63 6.5 -0.81 -0.73 6.2 75 1 0 1 1 1 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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