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PDBsum entry 3rdh
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Pore analysis for: 3rdh calculated with  MOLE 2.0
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PDB id
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3rdh
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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11 pores,
coloured by radius |
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10 pores,
coloured by radius
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10 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.63 |
2.34 |
34.7 |
-2.03 |
-0.63 |
24.8 |
85 |
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2 |
9 |
5 |
3 |
0 |
0 |
0 |
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2 |
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2.95 |
4.14 |
48.5 |
-2.78 |
-0.68 |
39.2 |
80 |
5 |
10 |
2 |
3 |
0 |
0 |
1 |
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3 |
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1.63 |
2.34 |
58.9 |
-1.96 |
-0.62 |
27.3 |
88 |
4 |
10 |
6 |
5 |
0 |
0 |
0 |
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4 |
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2.06 |
2.37 |
64.5 |
-2.54 |
-0.74 |
34.5 |
84 |
7 |
13 |
3 |
4 |
0 |
0 |
0 |
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5 |
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1.16 |
2.55 |
85.0 |
-1.94 |
-0.65 |
26.4 |
88 |
7 |
11 |
6 |
5 |
1 |
0 |
0 |
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6 |
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1.18 |
2.44 |
94.8 |
-2.09 |
-0.61 |
29.9 |
86 |
10 |
14 |
4 |
7 |
1 |
0 |
0 |
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7 |
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1.94 |
2.98 |
96.2 |
-2.62 |
-0.65 |
33.6 |
83 |
7 |
13 |
4 |
4 |
2 |
0 |
0 |
3RD 246 D
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8 |
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1.97 |
2.99 |
106.4 |
-2.45 |
-0.66 |
30.6 |
84 |
7 |
15 |
4 |
5 |
2 |
0 |
0 |
3RD 246 D
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9 |
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1.59 |
2.33 |
106.4 |
-2.36 |
-0.64 |
30.8 |
85 |
6 |
18 |
8 |
6 |
2 |
0 |
0 |
3RD 246 D
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10 |
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1.97 |
2.99 |
112.3 |
-2.49 |
-0.61 |
32.7 |
84 |
8 |
16 |
6 |
7 |
2 |
0 |
0 |
3RD 246 D
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program