 |
PDBsum entry 3rcp
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Tunnel analysis for: 3rcp calculated with  MOLE 2.0
|
PDB id
|
|
|
|
3rcp
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Tunnels calculated on whole structure |
|
Tunnels calculated excluding ligands
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
0 tunnels,
coloured by tunnel radius |
|
6 tunnels,
coloured by
tunnel radius
|
6 tunnels,
coloured as in
list below
|
|
|
|
|
|
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
|
|
|
|
|
|
|
Free R
|
|
|
|
|
|
|
Length
|
|
|
|
|
|
|
HPathy
|
|
|
|
|
|
|
HPhob
|
|
|
|
|
|
|
Polar
|
|
|
|
|
|
|
Rel Mut
|
|
|
|
|
|
|
Residue..type
|
|
|
|
|
|
|
Ligands
|
|
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.36 |
1.84 |
18.8 |
-0.75 |
0.18 |
12.0 |
55 |
|
2 |
0 |
0 |
3 |
4 |
0 |
0 |
|
MSE 61 A MSE 73 A GOL 104 A
|
 |
|
2 |
 |
1.37 |
1.84 |
19.4 |
0.02 |
0.20 |
8.6 |
51 |
2 |
0 |
0 |
2 |
5 |
0 |
0 |
MSE 61 A MSE 73 A GOL 104 A
|
|
3 |
 |
1.35 |
3.19 |
19.7 |
1.20 |
0.69 |
8.2 |
63 |
1 |
0 |
1 |
4 |
3 |
0 |
0 |
MSE 73 A
|
|
4 |
 |
1.47 |
2.74 |
22.3 |
-0.93 |
-0.16 |
17.3 |
73 |
3 |
2 |
0 |
4 |
2 |
0 |
0 |
MSE 61 A MSE 73 A
|
|
5 |
 |
1.48 |
2.76 |
23.0 |
-0.20 |
-0.03 |
13.6 |
69 |
3 |
2 |
0 |
3 |
3 |
0 |
0 |
MSE 61 A MSE 73 A
|
 |
6 |
 |
1.33 |
3.29 |
24.5 |
0.97 |
0.52 |
8.3 |
64 |
2 |
0 |
1 |
6 |
4 |
0 |
0 |
MSE 61 A MSE 73 A
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
 |
Residue-type_colouring |
 |
|
|
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
|
MOLE 2.0 program