PDBsum entry 3rcd Go to PDB code:  Tunnel analysis for: 3rcd calculated with MOLE 2.0 PDB id 3rcd Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 tunnels, coloured by tunnel radius 8 tunnels, coloured by tunnel radius 8 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.33 1.55 17.5 1.34 0.50 10.1 75 1 2 0 5 1 1 1   2 1.30 1.51 17.8 1.31 0.55 11.1 78 1 2 0 5 1 1 0   3 1.27 1.26 23.1 1.22 0.48 8.2 73 2 1 0 5 3 0 0   4 1.24 1.24 34.9 0.08 0.05 13.3 76 4 3 0 6 2 1 0   5 1.26 1.28 43.5 1.76 0.57 5.8 75 2 2 0 14 2 0 0  03P 9001 C 6 1.27 1.27 48.5 0.88 0.25 9.7 73 3 3 0 9 2 0 0  03P 9001 C 7 1.27 1.27 48.7 0.88 0.21 8.2 78 4 3 1 10 2 0 1  03P 9001 C 8 1.25 1.28 51.1 1.10 0.35 8.4 75 4 2 0 11 3 0 0  03P 9001 C Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.