spacer
spacer

PDBsum entry 3rc3

Go to PDB code: 
Top Page protein ligands metals pores links
Pore analysis for: 3rc3 calculated with MOLE 2.0 PDB id
3rc3
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
6 pores, coloured by radius 5 pores, coloured by radius 5 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.69 3.18 34.0 -2.37 -0.43 28.2 71 6 6 1 2 2 2 0  
2 1.95 2.45 39.7 -2.14 -0.49 21.7 78 5 4 4 2 1 2 0  MSE 429 A ANP 801 A
3 1.90 2.08 52.5 -2.06 -0.53 22.4 71 4 6 4 1 2 3 0  
4 1.83 2.88 69.6 -2.16 -0.40 25.7 73 6 4 4 3 3 2 0  MSE 626 A
5 1.90 2.04 84.7 -2.04 -0.53 23.0 76 7 6 6 3 1 3 0  MSE 295 A MSE 626 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer